Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs17833971 chr19:33928743 T/C 1.9E-5 111 16.77 10.67 3 KM Plot
LAML rs17834073 chr19:33966453 A/G 1.9E-5 111 16.77 10.67 3 KM Plot
LAML rs1804994 chr19:48258717 A/G 3.21E-7 108 5.1 21.87 15.17 KM Plot
LAML rs1807356 chr2:136555484 C/T 4.43E-7 111 0.5 8.1 19.8 KM Plot
LAML rs1814698 chr10:31015462 G/C 0.000176 111 1 6.58 16.2 KM Plot
LAML rs185724878 chr5:25961012 A/C 0.000145 111 15.17 16.17 0 KM Plot
LAML rs1862485 chr19:48282172 T/C 1.06E-8 106 5.6 22.37 12.17 KM Plot
LAML rs1862603 chr19:16229236 A/G 0.000133 107 16.2 8.13 0 KM Plot
LAML rs1869033 chr8:1104749 T/C 0.000173 109 0 13.1 16.17 KM Plot
LAML rs1869514 chr2:39205796 C/T 0.000134 111 0 5.57 16.27 KM Plot
LAML rs1872586 chr7:46229532 A/G 6.55E-5 110 15.17 13.73 0 KM Plot
LAML rs187812622 chr12:48894509 G/A 0.000148 109 16.23 10.13 0 KM Plot
LAML rs188552254 chr19:19517169 A/G 9.93E-5 111 16.3 9.1 0 KM Plot
LAML rs190720679 chr17:30407483 T/C 4.46E-5 105 16.23 15.23 0 KM Plot
LAML rs191387652 chr5:25938578 C/A 0.000145 111 15.17 16.17 0 KM Plot